Executable Biology

Computing cancer using computational modelling

(From the archive)

Can a robot get cancer? Silly question. Our bodies are made of cells. Robots aren’t. Cells are the basic building blocks of life and come in lots of different forms from long thin nerve cells that allow us to sense the world, to round blood cells that carry oxygen around our bodies. Cancer occurs when cells go rogue and start reproducing in an uncontrolled way. A computer can’t get cancer, but you can allow virtual diseases to attack virtual cells inside a computer. Doing that may just help find cures. That is what Jasmin Fisher, who leads a research group at Microsoft Research in Cambridge, has devoted her career to.

Becoming a medic isn’t the only way to help save lives!

Computational Modelling is changing the way the sciences are done. It is the idea that you can run experiments on virtual versions of things you are investigating. A computer model is essentially just a program that simulates the phenomena of interest. For example, by writing a program that simulates the laws of Physics, you can use it to run virtual Physics experiments about the motion of the planets, say. If your virtual planets do follow the paths real planets do, then you have evidence the laws are right. If they don’t your laws (or the models) need to change. You can also make predictions such as when an eclipse will happen. If you are right it suggests the laws you coded are good descriptions of reality. If wrong, back to the drawing board.

Jasmin has been pioneering this idea with the stuff of life and death. She focusses on modelling cells and the specific ways that we think cancer attacks them. It gives a way of exploring what is going on at the level of the molecules inside cells, and so how well new medicines might, or might not, work. Experiments can be done quickly and easily on the programmed models by running simulations. That means the real experiments, taking up expensive lab time, can focus on things that are most likely to be successful. Jasmin’s work has helped researchers design more effective actual experiments because they start with a better understanding of what is going on. One of the most important questions she is studying is how cells end up becoming what they are, and how this differs between normal cells and cancer cells. Understand this and we will be much closer to understanding how to stop cancer.

Paul Curzon, Queen Mary University of London

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How to get a head in robotics

[This article includes a free papercraft activity with a paper robot that expresses ’emotions’.]

If humans are ever to get to like and live with robots we need to understand each other. One of the ways that people let others know how they are feeling is through the expressions on their faces. A smile or a frown on someone’s face tells us something about how they are feeling and how they are likely to react. We can also tell something of a person’s emotions from their eyes and eyebrows. Some scientists think it might be possible for robots to express feelings this way too, but understanding how a robot can usefully express its ‘emotions’ (what its internal computer program is processing and planning to do next), is still in its infancy. A group of researchers in Poland, at Wroclaw University of Technology, have come up with a clever new design for a robot head that could help a computer show its feelings. It’s inspired by the Teenage Mutant Ninja Turtles cartoon and movie series.

The real Emys orbicularis (European pond turtle) Image by Luis Fernández García, CC BY-SA 3.0 from Wikimedia

The real Teenage Mutant Ninja Turtle

Their turtle-inspired robotic head called EMYS, which stands for EMotive headY System is cleverly also the name of a European pond turtle, Emys orbicularis. Taking his inspiration from cartoons, the project’s principal ‘head’ designer Jan Kedzierski created a mechanical marvel that can convey a whole range of different emotions by tilting a pair of movable discs, one of which contains highly flexible eyes and eyebrows.

Eye see

The CS4FN/LIREC emotional Robot face with three discs like EMYS
Image by CS4FN

The lower disc imitates the movements of the human lower jaw, while the upper disk can mimic raising the eyebrows and wrinkling the forehead. There are eyelids and eyebrows linked to each eye. Have a look at your face in the mirror, then try pulling some expressions like sadness and anger. In particular look at what these do to your eyes. In the robot, as in humans, the eyelids can move to cover the eye. This helps in the expression of emotions like sadness or anger, as your mirror experiment probably showed.

Pop eye

But then things get freaky and fun. Following the best traditions of cartoons, when EMYS is ‘surprised’ the robot’s eyes can shoot out to a distance of more than 10 centimetres! This well-known ‘eyes out on stalks’ cartoon technique, which deliberately over-exaggerates how people’s eyes widen and stare when they are startled, is something we instinctively understand even though our eyes don’t really do this. It makes use of the fact that cartoons take the real world to extremes, and audiences understand and are entertained by this sort of comical exaggeration. In fact it’s been shown that people are faster at recognising cartoons of people than recognising the un- exaggerated original.

High tech head builder

The mechanical internals of EMYS consist of lightweight aluminium, while the covering external elements, such as the eyes and discs, are made of lightweight plastic using 3D rapid prototyping technology. This technology allows a design on the computer to be ‘printed’ in plastic in three dimensions. The design in the computer is first converted into a stack of thin slices. Each slice of the design, from the bottom up, individually oozes out of a printer and on to the slice underneath, so layer-by-layer the design in the computer becomes a plastic reality, ready for use.

Facing the future

A ‘gesture generator’ computer program controls the way the head behaves. Expressions like ‘sad’ and ‘surprised’ are broken down into a series of simple commands to the high-speed motors, moving the various lightweight parts of the face. In this way EMYS can behave in an amazingly fluid way – its eyes can ‘blink’, its neck can turn to follow a person’s face or look around. EMYS can even shake or nod its head. EMYS is being used on the Polish group’s social robot FLASH (FLexible Autonomous Social Helper) and also with other robot bodies as part of the LIREC project (www.lirec.eu [archived]). This big project explores the question of how robot companions could interact with humans, and helps find ways for robots to usefully show their ‘emotions’.

Do try this at home

You can program a paper version of an EMYS-like robot. Download and follow the instructions on the Emotion Machine in the printable version below and build your own EMYS.

Print, cut out and make your own emotional robot. The strips of paper at the top (‘sliders’) containing the expressions and letters are slotted into the grooves on the robot’s face and happy or annoyed faces can created by moving the sliders.

By selecting a series of different commands in the Emotion Engine boxes, the expression on EMYS’s face will change. How many different expressions can you create? What are the instructions you need to send to the face for a particular expression? What emotion do you think that expression looks like – how would you name it? What would you expect the robot to be ‘feeling’ if it pulled that face?

Emotion Machine Sheet - a robot head with strips to thread foreyes, eyebrow and mouth
Click on the image to go to the download page. Activity sheet by CS4FN

Go further

Why not draw your own sliders, with different eye shapes, mouth shapes and so on. Explore and experiment! That’s what computer scientists do.

Paul Curzon, Queen Mary University of London


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Letters from the Victorian Smog: Braille: binary, bits & bytes

We take for granted that computers use binary: to represent numbers, letters, or more complicated things like music and pictures…any kind of information. That was something Ada Lovelace realised very early on. Binary wasn’t invented for computers though. Its first modern use as a way to represent letters was actually invented in the first half of the 19th century. It is still used today: Braille.

Braille is named after its inventor, Louis Braille. He was born 6 years before Ada though they probably never met as he lived in France. He was blinded as a child in an accident and invented the first version of Braille when he was only 15 in 1824 as a way for blind people to read. What he came up with was a representation for letters that a blind person could read by touch.

Choosing a representation for the job is one of the most important parts of computational thinking. It really just means deciding how information is going to be recorded. Binary gives ways of representing any kind of information that is easy for computers to process. The idea is just that you create codes to represent things made up of only two different characters: 1 and 0. For example, you might decide that the binary for the letter ‘p’ was: 01110000. For the letter ‘c’ on the other hand you might use the code, 01100011. The capital letters, ‘P’ and ‘C’ would have completely different codes again. This is a good representation for computers to use as the 1’s and 0’s can themselves be represented by high and low voltages in electrical circuits, or switches being on or off.

He was inspired by an earlier ‘Night Writing’ system developed by Charles Barbier to allow French soldiers in the 1800s to read military messages without using a lamp (which gave away their position, putting them at risk).

The first representation Louis Braille chose wasn’t great though. It had dots, dashes and blanks – a three symbol code rather than the two of binary. It was hard to tell the difference between the dots and dashes by touch, so in 1837 he changed the representation – switching to a code of dots and blanks.

He had invented the first modern
form of writing based on binary.

Braille works in the same way as modern binary representations for letters. It uses collections of raised dots (1s) and no dots (0s) to represent them. Each gives a bit of information in computer science terms. To make the bits easier to touch they’re grouped into pairs. To represent all the letters of the alphabet (and more) you just need 3 pairs as that gives 64 distinct patterns. Modern Braille actually has an extra row of dots giving 256 dot/no dot combinations in the 8 positions so that many other special characters can be represented. Representing characters using 8 bits in this way is exactly the equivalent of the computer byte.

Modern computers use a standardised code, called Unicode. It gives an agreed code for referring to the characters in pretty well every language ever invented including Klingon! There is also a Unicode representation for Braille using a different code to Braille itself. It is used to allow letters to be displayed as Braille on computers! Because all computers using Unicode agree on the representations of all the different alphabets, characters and symbols they use, they can more easily work together. Agreeing the code means that it is easy to move data from one program to another.

The 1830s were an exciting time to be a computer scientist! This was around the time Charles Babbage met Ada Lovelace and they started to work together on the analytical engine. The ideas that formed the foundation of computer science must have been in the air, or at least in the Victorian smog.

Paul Curzon and Jo Brodie, Queen Mary University of London


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Only the fittest slogans survive!

Being creative isn’t just for the fun of it. It can be serious too. Marketing people are paid vast amounts to come up with slogans for new products, and in the political world, a good, memorable soundbite can turn the tide over who wins and loses an election. Coming up with great slogans that people will remember for years needs both a mastery of language and a creative streak too. Algorithms are now getting in on the act, and if anyone can create a program as good as the best humans, they will soon be richer than the richest marketing executive. Polona Tomašicˇ and her colleagues from the Jožef Stefan Institute in Slovenia are one group exploring the use of algorithms to create slogans. Their approach is based on the way evolution works – genetic algorithms. Only the fittest slogans survive!

A mastery of language

To generate a slogan, you give their program a short description on the slogan’s topic – a new chocolate bar perhaps. It then uses existing language databases and programs to give it the necessary understanding of language.

First, it uses a database of common grammatical links between pairs of words generated from wikipedia pages. Then skeletons of slogans are extracted from an Internet list of famous (so successful) slogans. These skeletons don’t include the actual words, just the grammatical relationships between the words. They provide general outlines that successful slogans follow.

From the passage given, the program pulls out keywords that can be used within the slogans (beans, flavour, hot, milk, …). It generates a set of fairly random slogans from those words to get started. It does this just by slotting keywords into the skeletons along with random filler words in a way that matches the grammatical links of the skeletons.

Breeding Slogans

New baby slogans are now produced by mating pairs of initial slogans (the parents). This is done by swapping bits into the baby from each parent. Both whole sections and individual words are swapped in. Mutation is allowed too. For example, adjectives are added in appropriate places. Words are also swapped for words with a related meaning. The resulting children join the new population of slogans. Grammar is corrected using a grammar checker.

Culling Slogans

Slogans are now culled. Any that are the same as existing ones go immediately. The slogans are then rated to see which are fittest. This uses simple properties like their length, the number of keywords used, and how common the words used are. More complex tests used are based on how related the meanings of the words are, and how commonly pairs of words appear together in real sentences. Together these combine to give a single score for the slogan. The best are kept to breed in the next generation, the worst are discarded (they die!), though a random selection of weaker slogans are also allowed to survive. The result is a new set of slogans that are slightly better than the previous set.

Many generations later…

The program breeds and culls slogans like this for thousands, even millions of generations, gradually improving them, until it finally chooses its best. The slogans produced are not yet world beating on their own, and vary in quality as judged by humans. For chocolate, one run came up with slogans like “The healthy banana” and “The favourite oven”, for example. It finally settled on “The HOT chocolate” which is pretty good.

More work is needed on the program, especially its fitness function – the way it decides what is a good slogan and what isn’t. As it stands this sort of program isn’t likely to replace anyone’s marketing department. They could help with brainstorming sessions though, to spark new ideas but leaving humans to make the final choice. Supporting human creativity rather than replacing it is probably just as rewarding for the program after all.

(From the archive)


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Issue 22 Cover Creative Computing

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What are birds actually saying?

Birds make so much noise, and it’s very complex. Is it just babble, or are they saying complicated things to each other? If so, could we work out what they are saying, what it means? Could we learn their language and speak to the birds?

We know that bird communication is not as complicated as the words and sentences in human speech. So far, no one has been able to find grammatical patterns like those we find in human language. There apparently aren’t rules for birds like the ones we have about verbs and nouns. Birds don’t have to learn grammar! Exactly how complex bird languages are is still hotly debated, though.

Sometimes they’re passing on information about predators, or food, or sometimes just advertising their own fitness – showing off to get a mate (a bit like karaoke nights). Scientists have proved that such specific kinds of information are in the sounds birds make by observing bird behaviour. By playing recordings of birds and seeing how other birds react, they can see what information was communicated by a particular sound. If you play a ‘predator near’ call, for example, then other birds flee, but they stay put if you play other calls. They get the message.

Birds are definitely passing on
specific information when they sing.

It turns out some birds have even learnt the languages of other animals and use it both to help those other animals and to support a life of crime. Many animals listen for the alarm calls of the animals around them, and so flee when others see a problem. Birds called Drongos, for example, act as lookouts for Meerkats, giving warning calls when they see Meerkat predators, allowing them to return to the safety of their burrows. However, the Drongos also sound false alarms every so often. They do it when they see a Meerkat with some juicy morsel. As the Meerkats run, the Drongo swoops in to steal the abandoned food.

Unfortunately for the Drongo, Meerkats are quite clever and get wise to the con. Eventually, they start to ignore the Drongo and only listen for their own Meerkat sentry’s call. The Drongo has another trick though. They are really good at mimicking sounds they hear, just like parrots. They have learnt to speak Meerkat just like the scientists do in experiments. So when the Meerkats stop reacting, the Drongos just switch tactics and start making perfect Meerkat language alarm calls instead. Once again the food is theirs.

Drongos give false alarms so they can steal food.

While most of us can’t reproduce bird sounds ourselves, and so talk directly to animals, we can certainly write programs to do it. In Star Wars, C3PO is a master of languages, speaking millions. Real robots of the near future will be able to mimic the sounds of whatever animals they wish and communicate with them in at least the simple ways that animals of different species listen and talk to each other. Perhaps something like this might be used to help protect endangered species from their predators, for example, watching for hawks and issuing timely warnings. We just have to hope they don’t turn to the Dark Side, like the Drongos, and use these skills to support a life of crime.

Dan Stowell and Paul Curzon, Queen Mary University of London

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  • Issue 21: Computing Sounds Wild
    • Computing Sounds Wild explores the work of scientists and engineers who are using computers to understand, identify and recreate wild sounds, especially those of birds. We see how sophisticated algorithms that allow machines to learn, can help recognize birds even when they can’t be seen, so helping conservation efforts. We see how computer models help biologists understand animal behaviour, and we look at how electronic and computer generated sounds, having changed music, are now set to change the soundscapes of films. Making electronic sounds is also a great, fun way to become a computer scientist and learn to program.
The front cover of issue 21 of CS4FN called Computing Sounds Wild

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Ada Lovelace: Visionary

It is 1843, Queen Victoria is on the British throne. The industrial revolution has transformed the country. Steam, cogs and iron rule. The first computers won’t be successfully built for a hundred years. Through the noise and grime one woman sees the future. A digital future that is only just being realised.

Ada Lovelace is often said to be the first programmer. She wrote programs for a designed, but yet to be built, computer called the Analytical Engine. She was something much more important than a programmer, though. She was the first truly visionary person to see the real potential of computers. She saw they would one day be creative.

Charles Babbage had come up with the idea of the Analytical Engine – how to make a machine that could do calculations so we wouldn’t need to do it by hand. It would be another century before his ideas could be realised and the first computer was actually built. As he tried to get the money and build the computer, he needed someone to help write the programs to control it – the instructions that would tell it how to do calculations. That’s where Ada came in. They worked together to try and realise their joint dream, jointly working out how to program.

Ada also wrote “The Analytical Engine has no pretensions to originate anything.” So how does that fit with her belief that computers could be creative? Read on and see if you can unscramble the paradox.

Ada was a mathematician with a creative flair and while Charles had come up with the innovative idea of the Analytical Engine itself, he didn’t see beyond his original idea of the computer as a calculator, she saw that they could do much more than that.

The key innovation behind her idea was that the numbers could stand for more than just quantities in calculations. They could represent anything – music for example. Today when we talk of things being digital – digital music, digital cameras, digital television, all we really mean is that a song, a picture, a film can all be stored as long strings of numbers. All we need is to agree a code of what the numbers mean – a note, a colour, a line. Once that is decided we can write computer programs to manipulate them, to store them, to transmit them over networks. Out of that idea comes the whole of our digital world.

Ada saw even further though. She combined maths with a creative flair and so she realised that not only could they store and play music they could also potentially create it – they could be composers. She foresaw the whole idea of machines being creative. She wasn’t just the first programmer, she was the first truly creative programmer.

Paul Curzon, Queen Mary University of London

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The red sock of doom – trying to catch mistakes before they happen

Washing machine mistake
Washing machine with red sock in white washing. Image by Dominic Furniss from Errordiary and Flikr, provided for this article CC BY-NC-SA 2.0

A red sock in with your white clothes wash – guess what happened next? What can you do to prevent it from happening again? Why should a computer scientist care? It turns out that red socks have something to teach us about medical gadgets.

How can we stop red socks from ever turning our clothes pink again? We need a strategy. Here are some possibilities.

  • Don’t wear red socks.
  • Take a ‘how to wash your clothes’ course.
  • Never make mistakes.
  • Get used to pink clothes.

Let’s look at them in turn – will they work?

Don’t wear red socks: That might help but it’s not much use if you like red socks or if you need them to match your outfit. And how would it help when you wear purple, blue or green socks? Perhaps your clothes will just turn green instead.

Take a ‘how to wash your clothes’ course: Training might help: you’d certainly learn that a red sock and white clothes shouldn’t be mixed, you probably did know that anyway, though. It won’t stop you making a similar mistake again.

Never make misteaks: Just never leave a red sock in your white wash. If only! Unfortunately everyone makes mistakes – that’s why we have erasers on pencils and a delete key on computers – this idea just won’t work.

Get used to pink clothes: Maybe, but it’s not ideal. It might not be so great turning up to school in a pink shirt if everyone else is wearing a white one.

What if the problem’s more serious?

We can probably live with pink clothes, but what happens if a similar mistake is made at a hospital? Not socks, but medicines. We know everyone makes mistakes so how do we stop those mistakes from harming patients? Special machines are used in hospitals to pump medicine directly into a patient’s arm, for example, and a nurse needs to tell it how much medicine to give – if the dose is wrong the patient won’t get better, and might even get worse.

What have we learned from our red sock strategies? We can’t stop giving patients medicine and we don’t want to get used to mistakes so our first and fourth strategies won’t work. We can give nurses more training but everyone makes mistakes even when trained, so the third suggestion isn’t good enough either and it doesn’t stop someone else making the same mistake.

We need to stop thinking of mistakes as a problem that people make and instead as a problem that systems thinking can solve. That way we can find solutions that work for everyone. One possibility is to check whether changes to the device might make mistakes less likely in the first place.

Errors? Or arrows?

Most medical machines are controlled with a panel with numbered keys (a number keypad) like on mobile phones, or up and down arrows (an arrow keypad) like you sometimes get on alarm clocks. CHI+MED researchers have been asking questions like: which way is best for entering numbers quickly, but also which is best for entering numbers accurately? They’ve been running experiments where people use different keypads, are timed and their mistakes are recorded. The researchers also track where people are looking while they use the keypads. Another approach has been to create mathematical descriptions of the different keypads and then mathematically explore how bad different errors might be.

It turns out that if you can see the numbers on a keypad in front of you it’s very easy to type them in quickly, though not always correctly! You need to check the display to see if you have actually put in the right ones. Worse, mistakes that are made are often massive – ten times too much or more. The arrow keypads are a little slower to use but because people are already looking at the display (to see what numbers are appearing) they can help nurses be more accurate, not only are fewer mistakes made but those that are made tend to be smaller.

Smart machines help users

A medical device that actively helps users avoid mistakes helps everyone using it (and the patients it’s being used on!). Changing the interface to reduce errors isn’t the only solution though. Modern machines have ‘intelligent drug libraries’ that contain information about the medicines and what sort of doses are likely and safe. Someone might still mistakenly tell the machine to give too high a dose but now it can catch the error and ask the nurse to double-check. That’s like having a washing machine that can spot a brightly coloured sock in a white wash and that refuses to switch on till it has been removed.

Building machines with a better ability to catch errors (remember, we all make mistakes) and helping users to recover from them easily is much more reliable than trying to get rid of all possible errors by training people. It’s not about avoiding red socks, or errors, but about putting better systems in place to make sure that we find them before we press that big ‘Start’ button.

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You can find a copy of this article on pages 4 and 5 in issue 17 (Machines Making Medicine Safer) of CS4FN 17. This article was originally published on CHI+MED

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Die another Day? Or How Madonna crashed the Internet

A lone mike in front of stage lights
Image by Pexels from Pixabay

When pop star Madonna took to the stage at Brixton Academy in 2001 for a rare appearance she made Internet history and caused more that a little Internet misery. Her concert performance was webcast; that is it was broadcast real time over the Internet. A record-breaking audience of 9 million tuned in, and that’s where the trouble started…

The Internet’s early career

The Internet started its career as a way of sending text messages between military bases. What was important was that the message got through, even if parts of the network were damaged say, during times of war. The vision was to build a communications system that could not fail; even if individual computers did, the Internet would never crash. The text messages were split up into tiny packets of information and each of these was sent with an address and their position in the message over the wire. Going via a series of computer links it reached its destination a bit like someone sending a car home bit by bit through the post and then rebuilding it. Because it’s split up the different bits can go by different routes.

Express yourself (but be polite please)

To send all these bits of information a set of protocols (ways of communicating between the computers making up the Internet) were devised. When passing on a packet of information the sending machine first asks the receiving machine if it is both there and ready. If it replies yes then the packet is sent. Then, being a polite protocol, the sender asks the receiver if the packets all arrived safely. This way, with the right address, the packets can find the best way to go from A to B. If on the way some of the links in the chain are damaged and don’t reply, the messages can be sent by a different route. Similarly if some of the packets gets lost in transit between links and need to be resent, or packets are delayed in being sent because they have to go by a round about route, the protocol can work round it. It’s just a matter of time before all the packets arrive at the final destination and can be put back in order. With text the time taken to get there doesn’t really matter that much.

The Internet gets into the groove

The problem with live pop videos, like a Madonna concert, is that it’s no use if the last part of the song arrives first, or you have to wait half an hour for the middle chorus to turn up, or the last word in a sentence vanishes. It needs to all arrive in real time. After all, that is how it’s being sung. So to make web casting work there needs to be something different, a new way of sending the packets. It needs to be fast and it needs to deal with lots more packets as video images carry a gigantic amount of data. The solution is to add something new to the Internet, called an overlay network. This sits on top of the normal wiring but behaves very differently.

The Internet turns rock and roll rebel

So the new real time transmission protocol gets a bit rock and roll, and stops being quite so polite. It takes the packets and throws them quickly onto the Internet. If the receiver catches them, fine. If it doesn’t, then so what? The sender is too busy to check like in the old days. It has to keep up with the music! If the packets are kept small, an odd one lost won’t be missed. This overlay network called the Mbone, lets people tune into the transmissions like a TV station. All these packages are being thrown around and if you want to you can join in and pick them up.

Crazy for you

Like dozens of cars
all racing to get through
a tunnel there were traffic jams.
It was Internet gridlock.

The Madonna webcast was one of the first real tests of this new type of approach. She had millions of eager fans, but it was early days for the technology. Most people watching had slow dial-up modems rather than broadband. Also the number of computers making up the links in the Internet were small and of limited power. As more and more people tuned in to watch, more and more packets needed to be sent and more and more of the links started to clog up. Like dozens of cars all racing to get through a tunnel there were traffic jams. Packets that couldn’t get through tried to find other routes to their destination … which also ended up blocked. If they did finally arrive they couldn’t get through onto the viewers PC as the connection was slow, and if they did, very many were too late to be of any use. It was Internet gridlock.

Who’s that girl?

Viewers suffered as the pictures and sound cut in and out. Pictures froze then jumped. Packets arrived well after their use by date, meaning earlier images had been shown missing bits and looking fuzzy. You couldn’t even recognise Madonna on stage. Some researchers found that packets had, for example, passed over seven different networks to reach a PC in a hotel just four miles away. The packets had taken the scenic route round the world, and arrived too late for the party. It wasn’t only the Madonna fans who suffered. The broadcast made use of the underlying wiring of the Internet and it had filled up with millions of frantic Madonna packets. Anyone else trying to use the Internet at the time discovered that it had virtually ground to a halt and was useless. Madonna’s fans had effectively crashed the Internet!

Webcasts in Vogue

Today’s webcasts have moved on tremendously using the lessons learned from the early days of the Madonna Internet crash. Today video is very much a part of the Internet’s day-to-day duties: the speed of the computer links of the Internet and their processing power has increased massively; more homes have broadband so the packets can get to your PC faster; satellite uplinks now allow the network to identify where the traffic jams are and route the data up and over them; extra links are put into the Internet to switch on at busy times; there are now techniques to unnoticeably compress videos down to small numbers of packets, and intelligent algorithms have been developed to reroute data effectively round blocks. We can also now combine the information flowing to the viewers with information coming back from them so allowing interactive webcasts. With the advent of digital television this service is now in our homes and not just on our PC’s.

Living in a material world

It’s because of thousands of scientists working on new and improved technology and software that we can now watch as the housemate’s antics stream live from the Big Brother house, vote from our armchair for our favourite talent show contestant or ‘press red’ and listen to the director’s commentary as we watch our favourite TV show. Like water and electricity the Internet is now an accepted part of our lives. However, as we come up with even more popular TV shows and concerts, strive to improve the quality of sound and pictures, more people upgrade to broadband and more and more video information floods the Internet … will the Internet Die another Day?

Peter W. McOwan and Paul Curzon, Queen Mary University of London, 2006

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Back (page) to health

Woman wearing VR headset looking at the sky.
Image by Pexels from Pixabay

Improvements in technology and decision making are transforming the way we look after our health. Here are some more interesting ideas to keep people alive and well.

The future is in your poo

You’ve heard of telling a person’s future from reading their tea leaves. Scientists believe an effective way of seeing a town’s future may be in the poo. By looking for infection in the waste at sewerage works it’s possible to get fast and accurate local knowledge of where infection rates are high and where low to feed into decision making tools.

Health advice: Stay in the toilet, Stay safe. Help the NHS.

Virtually breaking quarantine

The game, World of Warcraft, a multi-user dungeon game, helped virologists understand how people might behave in pandemics. The game’s developers released a plague that could be passed between avatars. The game’s contaminated area was quarantined. Rather than dying out, the virus escaped – because people broke into the quarantined areas to gawk, then left taking the virus with them.

Health advice: Your avatar should obey quarantine rules too!

The missing bullet holes

To stay healthy in a war, avoid being hit by a bullet. In World War II, many aircraft returned badly damaged. Abraham Wald studied them to decide where better armour was needed. There were more bullet holes in the fuselage than the engines. Where would you add the armour? Abraham added it where there were no bullet holes. He reasoned that the lack of holes in places like engines on returning planes meant that being hit there brought the plane down. Being hit elsewhere did not kill the pilots as those planes made it home!

Health advice: Dodge bullets by making good decisions …

Cybersick of virtual reality

The AI can detect puke-inducing movement and automatically correct the image.

A problem with virtual reality is that wearing a headset can be so immersive that it makes some people actually sick. This happens if you move about when watching a 3D video that was shot from a single place. Artificial intelligence software has come to the rescue, detecting puke-inducing movement and automatically correcting the image.

Health advice: If no bucket, always keep an AI handy.

Shining light on cancers

Cancer treatments like chemotherapy and radiotherapy make patients ill. Some drugs make cancer sensitive to light, allowing tumours to be killed by painlessly shining light on them instead. Sadly, that’s not easy when cancers are inside the body. A new Japanese solution is an LED chip, based on the technology used by contactless payment cards to provide power from a distance. Surgeons place it under the skin and leave it there. They glue it in place using a sticky protein from the feet of mussels. It shines low-intensity green light on the cancer, shrinking it.

Health advice: Stick a chip to your tumour

Smart sometimes means no gadgets

Being smart about health doesn’t have to be high-tech or even involve drugs. Exercise, for example, can be as effective helping with depression as taking medicine. Being out in nature can help too, so sometimes it’s worth leaving the gadgets behind and just going for a walk to enjoy the beauty of nature.

Health advice: Walk weekly in the woods

Paul Curzon, Queen Mary University of London, Spring 2021

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This post and issue 27 of the cs4fn magazine have been funded by EPSRC as part of the PAMBAYESIAN project on research agreement EP/P009964/1.

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This blog is funded by EPSRC on research agreement EP/W033615/1.

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